Stats & BioComp WEB

    I'm Assistant Professor at the Institute of Statistical Mathematics (ISM; Research Organization of Information and Systems; Japan). My research activity involves Statistical Sicence and its applications in Systems Biology.

    This web site leads to information on research, including publication, presentation, and the other relevant information. Reprints of my papers and softwares are accessible from this web site.


    Duke Chapel, North Carolina, 2008-12


    NEWS

    June 2010
    Publication

    "Bayesian experts in exploring reaction kinetics of transcription circuits" to appear in Bioinformatics.

    June 2010
    Publication

    "Bayesian learning in sparse graphical factor models via variational mean-field annealing", published in Journal of Machine Learning Research (JMLR), 11:1771-1798, 2010.

    May 2010
    Publication

    "Implementation of sequential importance sampling in GPGPU" to appear in Proceedings of the 13th International Conference on Information Fusion.

    Mar 2010
    Publication

    "Bayesian learning in sparse graphical factor models via annealed entropy" to appear in Journal of Machine Learning Research (JMLR).

    Jan 2010
    Software

    VMA2GFM version 2 is released.

    Dec 2009
    Publication

    "A state space representation of VAR models with sparse learning for dynamic gene networks" has been published in Genome Informatics.

    May 2009
    Supporting Information

    Supplementary materials of "Sparse Bayes learning by annealing entropy" are now accessible the supporting information web site.

    May 2009
    Technical Report

    "Sparse Bayes learning by annealing entropy" is now available at SAMSI technical reports.

    April 2009
    Grant

    Grant-in-Aid for Young Scientists (B)

    April 2009
    Publication

    "Graphical modeling of intercellular biochemical pathways and statistical inference" has been accepted by Bioinformatics special issue of Journal of the Japan Statistical Society (Japanese issue).

    Dec 2008
    Award

    "Predicting differences in gene regulatory systems by state space models" was awarded as "Finalist Best Paper Award" by 19th International Conference on Genome Informatics (GIW2008).

    Nov 2008
    Publication

    "Bayesian learning of biological pathways on genomic data assimilation" has been published in Bioinformatics.

    Sep 2008 Publication

    "Parameter estimation of in silico biological pathways with particle filtering towards a petascale computing" has been accepted by Pacific Symposium on Biocomputing (PSB) 2009.

    Aug 2008 Publication

    "ExonMiner: web service for analysis of GeneChip exon array data" has been accepted by BMC Bioinformatics.